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genetic function approximation gfa algorithm  (Accelrys)

 
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    Accelrys genetic function approximation gfa algorithm
    Genetic Function Approximation Gfa Algorithm, supplied by Accelrys, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genetic+algorithm/algorithm+approximation+function+genetic+gfa/pm41232355-77-5-19
    Average 86 stars, based on 1 article reviews
    genetic function approximation gfa algorithm - by Bioz Stars, 2026-09
    86/100 stars

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    Article Title: Insilco study on the toxicity of anti-cancer compounds tested against MOLT-4 and p388 cell lines using GA-MLR technique
    Article Snippet: Genetic algorithm technique inserted in the Accelrys Material Studio package version 7.0 (BIOVIA, 2014) was utilized to choose the ideal number of descriptors, the impacts of the quantity of the descriptors were researched for one to five descriptors and with the chose descriptors, we have assembled the direct model utilizing the preparation set information, and acquired the accompanying mathematical statements.

    Article Title: In Silico Investigation of Cytochrome P450 2C9 in relation to Aging Using Traditional Chinese Medicine
    Article Snippet: Before creating the prediction model, the descriptors of the ligand were evaluated through the Genetic Approximation (GA) algorithm of the Calculate Molecular Properties module in Accelrys Discovery Studio 2.5 (Table S2) [ ].

    Article Title: Design and synthesis of novel quinazolinone-pyrazole derivatives as potential α-glucosidase inhibitors: Structure-activity relationship, molecular modeling and kinetic study.
    Article Snippet: In this study, a new series of quinazolinone-pyrazole hybrids were designed, synthesized and screened for their α-glucosidase inhibitory activity.. The results of the in vitro screening indicated that all the molecular hybrids exhibited more inhibitory activity (IC50 values ranging from 60.5 ± 0.3 μM-186.6 ± 20 μM) in comparison to standard acarbose (IC50 = 750.0 ± 10.0 μM).. Limited structure–activity relationship suggested that the variation in the inhibitory activities of the compounds affected by different substitutions on phenyl rings of diphenyl pyrazole moiety.

    Binding Assay:

    Article Title: Computer-aided scaffold hopping to identify a novel series of casein kinase 1 delta (CK1d) inhibitors for amyotrophic lateral sclerosis.
    Article Snippet: In this study as the first attempt; comparative molecular field analysis (CoMFA), comparative molecular similarity indices analysis (CoMSIA) and AutoGPA-based 3D-QSAR methods were applied on a set of 47 recently reported Ck1d inhibitors, in order to gain an insight into the structural requirements which providing guidelines for the design of next generation compounds with enhanced bioactivity.. The results of 3D-QSAR analyses indicated that hydrophobic and negatively charged groups at 6 position of benzothiazole ring and positively charged and bulky groups at ortho position of phenyl ring are favorable for high activity.. Moreover, molecular docking studies with GOLD protocol revealed that this chemical series has two different orientations in CK1d active site: orientation1, in which the benzothiazole ring of the compounds is the closet to the hydrophobic area created by Ile23 and 37, Ala36 Lys 38, Met80, 82 and Val81, and orientation 2, in which the benzene ring of the compounds is directed towards the hydrophobic center.

    Article Title: Kinetic studies, molecular docking, and antioxidant activity of novel 1,3-diphenyl pyrazole-thiosemicarbazone with anti-tyrosinase and anti-melanogenesis properties.
    Article Snippet: This study reports the Design Hypothesis of a novel series of 1,3-diphenyl pyrazole-thiosemicarbazone as novel tyrosinase inhibitors (TYRI).. The designed compounds were prepared and their TYRI activity and mechanisms were studied.. The results showed that the selected compounds exhibited potent tyrosinase inhibitory activities greater than that of kojic acid (KA).

    Article Title: Discovery of novel potential KIT inhibitors for the treatment of gastrointestinal stromal tumor
    Article Snippet: .. In this study, we employed CDOCKER algorithm (Genetic Optimization for Ligand Docking) from BIOVIA Discovery Studio 2016 (DS 3.0), for searching the binding space and ligand conformational space. ..

    Software:

    Article Title: Kinetic studies, molecular docking, and antioxidant activity of novel 1,3-diphenyl pyrazole-thiosemicarbazone with anti-tyrosinase and anti-melanogenesis properties.
    Article Snippet: This study reports the Design Hypothesis of a novel series of 1,3-diphenyl pyrazole-thiosemicarbazone as novel tyrosinase inhibitors (TYRI).. The designed compounds were prepared and their TYRI activity and mechanisms were studied.. The results showed that the selected compounds exhibited potent tyrosinase inhibitory activities greater than that of kojic acid (KA).

    Article Title: Design, synthesis and pharmacological evaluation of tricyclic derivatives as selective RXFP4 agonists.
    Article Snippet: Relaxin family peptide receptors (RXFPs) are the potential therapeutic targets for neurological, cardiovascular, and metabolic indications.. Among them, RXFP3 and RXFP4 (formerly known as GPR100 or GPCR142) are homologous class A G protein-coupled receptors with short N-terminal domain.. Ligands of RXFP3 or RXFP4 are only limited to endogenous peptides and their analogues, and no natural product or synthetic agonists have been reported to date except for a scaffold of indole-containing derivatives as dual agonists of RXFP3 and RXFP4.

    Generated:

    Article Title: Docking and database screening identify manidipine as a potential modulator of matrix metalloproteinase-7 in chronic kidney disease.
    Article Snippet: The LibDock module (BIOVIA Discovery Studio) was employed to generate docking poses of each ligand and calculate binding affinity with the receptor as a docking score to filter the DrugBank database. .. After the docking screen, a Genetic Function Approximation (GFA) algorithm generated predicted pharmacophore features from a single interested ligand. (BIOVIA Discovery Studio). ..



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